Public symposium of the BioHackathon 2014 will be held at the
Tohoku Medical Megabank
, Sendai, Japan, on Nov 9 (Sun).
Note for domestic participants
: The symposium is free and requires no prior registration, however, those who plan to have a conference lunch together with us, please make a reservation
here
just by adding your name (accepting until Sep 21st).
Note for speakers
: Please try to leave 5min for Q&A within a given slot.
-
8:30 Meet up at the hotel lobby
-
9:00 Registration opens
-
10:00 Introduction from organizers
|
10:00-10:05
|
Welcome address
|
|
10:05-10:20
|
Introduction to the NBDC/DBCLS BioHackathon 2014
|
|
|
Toshiaki Katayama
Database Center for Life Science, Japan
|
|
10:20-10:40
|
Introduction to the Tohoku Medical Megabank Organization (TBD)
|
|
|
Masao Nagasaki
Tohoku Medical Megabank Organization, Japan
|
|
10:40-11:00
|
Integrated database and triplestore in prospective cohort study at the Tohoku Medical Megabank Project
|
|
|
Soichi Ogishima
Tohoku Medical Megabank Organization, Japan
|
-
11:00 Coffee break
-
11:20 Invited talks
|
11:20-11:40
|
Embracing Semantic Web Technologies at the European Bioinformatics Institute
|
|
|
Simon Jupp
European Bioinformatics Institute, UK
|
|
11:40-12:00
|
Identifiers.org: new services to support the Semantic Web community
|
|
|
Sarala Wimalaratne
European Bioinformatics Institute, UK
|
|
12:00-12:20
|
Introduction to BioJS
|
|
|
Leyla Jael Garcia Castro
European Bioinformatics Institute, UK
|
-
12:20 Lightning talks #1
-
12:40 Lunch
-
13:30 Invited talks
|
13:30-13:45
|
Construction of ortholog database using the Semantic Web technology
|
|
|
Hirokazu Chiba
National Institute for Basic Biology, Japan
|
|
13:45-14:00
|
Semantic integration of orthology resources: beyond the OGO experience
|
|
|
Jesualdo Thomas Fernandez Breis
University of Murcia, Spain
|
|
14:00-14:20
|
Text mining for ontology learning and matching
|
|
|
Jung-Jae Kim
Nanyang Technological University, Singapore
|
-
14:20 Coffee break
-
14:40 Invited talks
|
14:40-15:00
|
Rhea: a reactions database linking biology and chemistry
|
|
|
Thierry Lombardot
Swiss Institute of Bioinformatics, Switzerland
|
|
15:00-15:20
|
PRIDE and ProteomeXchange – Making proteomics data accessible and reusable
|
|
|
Yasset Perez-Riverol
European Bioinformatics Institute, UK
|
|
15:20-15:40
|
PubChemRDF: Towards a semantic (web) description of PubChem
|
|
|
Evan Bolton
National Center for Biotechnology Information, US
|
|
15:40-16:00
|
Challenges and Solutions for Data Integrity in Linked Data Systems
|
|
|
Robert Buels
Foundation Medicine, US
|
-
16:00 Lightning talks #2
-
16:30 Group photo / ToMMo tour
-
17:30 Bus to the hackathon venue
-
19:00 Reception party
Live streaming will be available at
This embedded player is no longer available.
Video streaming by Ustream
|
|
